PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_43934.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 401aa    MW: 43567.8 Da    PI: 5.2766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_43934.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM843.1e-26622051128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tksgy.. 82 
                   lp+G++F+Ptd el+ e+L+ kv +      ++ +  +i+e+ +i++++P++Lp  +k + ++ +fF k +++   gkrk+r+       + +g   
  MLOC_43934.1  62 LPAGVKFDPTDLELL-EHLEGKVGRAAshehIDDFItTIEEAeGICYTHPENLP-GIKVDGSNNHFFNKISNAFDVGKRKRRKisnsdhtVCDGHfr 156
                   799************.99****9888755443332325888878**********.667788999******************856666652244345 PP

           NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkge...ktdWvmheyrl 128
                   W++tgk+k++l+++g  +g kk+Lv++ g+++ g      +W mh+y+l
  MLOC_43934.1 157 WHKTGKSKSILDNNGVIKGWKKILVLHMGSKKGGDedeIFNWRMHQYHL 205
                   ***************************88887776222579******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-2951224IPR003441NAC domain
PROSITE profilePS5100525.41262224IPR003441NAC domain
PfamPF023656.8E-1163205IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MASAAFKGSV IDSTASRCKL FIRSLITIIA AVIKNPTHPP PSQIECPNCK YHIDVLSQWP  60
GLPAGVKFDP TDLELLEHLE GKVGRAASHE HIDDFITTIE EAEGICYTHP ENLPGIKVDG  120
SNNHFFNKIS NAFDVGKRKR RKISNSDHTV CDGHFRWHKT GKSKSILDNN GVIKGWKKIL  180
VLHMGSKKGG DEDEIFNWRM HQYHLGVDQD ENHGELVASK VFRQSKKAGQ SVMCTVNEES  240
DSFAGEIDPT TPITYPPQPR PPNSSPSRTK QNQEEDAALY GPDERPSRGA TPEAAYPEMQ  300
SPPLDADAFQ GLPDPGTPPG FSLMASWLGG SSSLAVEVAP LSGLDERLSR GGTPDAAYPE  360
AEGQPLPLDA EAIQEFTDPG TPPDSFLGMQ LGSQGIGWPA C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141KRKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003581357.21e-108PREDICTED: NAC domain-containing protein 8-like
TrEMBLM0W5D60.0M0W5D6_HORVD; Uncharacterized protein
STRINGMLOC_43934.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.14e-55NAC domain containing protein 73